From existing panel, figures out open detectors, and returns potential fluorophores that might fit between the existing ones

Usage

QC_ProspectiveAdditions(
  path,
  NumberDetectors,
  TheCutoff = 0.9,
  returnAll = FALSE,
  filename,
  outpath,
  returnCSV
)

Arguments

path: Filepath to the panel .csv
NumberDetectors: Number of detectors for the instrument to pull references
TheCutoff: Default is 0.9, cosine matrix value
returnAll: Whether to return all variants, default is FALSE
filename: Desired name for the output .csv
outpath: Path Location to store the the output .csv
returnCSV: Whether to return as a csv to designated outpath and filename, a TRUE/FALSE

Value

A csv containing selected fluorophores

Examples

Folder_Location <- system.file("extdata", package = "Luciernaga")
ThePanelLocation <- list.files(Folder_Location, pattern="^Panel.csv",
 full.names=TRUE)
OutPath <- file.path("C:", "Users", "JohnDoe", "Desktop")

ProspectiveAdditions <- QC_ProspectiveAdditions(path=ThePanelLocation, NumberDetectors=64,
TheCutoff=0.9, returnAll=FALSE, returnCSV=FALSE,
filename="ProspectiveAdditions", outpath=OutPath)