Sister function to FolderSignature, returns a density plot of brightness

Usage

Luciernaga_FolderBrightness(
  FolderPath,
  sample.name,
  StringRemoval = NULL,
  fluorophore.name,
  Verbose = FALSE,
  stats = "median",
  PanelCuts = NULL,
  normalize = FALSE,
  detector,
  returnType = "data",
  maxtik = 1e+06,
  legend = "right"
)

Arguments

FolderPath: Location where the Luciernaga_QC .fcs file outputs are stored
sample.name: Keyword in .fcs corresponding samples name
StringRemoval: Default NULL, remove these from the sample name
fluorophore.name: The name of the fluorophore
Verbose: Default FALSE
stats: Default is median
PanelCuts: Default is NULL
normalize: Default is FALSE, will scale to peak detector
detector: The detector corresponding to the fluorophore, sets the x-axis
returnType: Default data, providing plot returns a Luciernaga_Brightness plot
maxtik: Default 1e6, for plot return
legend: Default is right, set to none to remove.

Value

Either a data.frame of brightness values, or a plot

Examples

A <- 2+2